miRBase entry: gma-MIR4389

Stem-loop gma-MIR4389


Accession
MI0016543
Description
Glycine max gma-MIR4389 precursor miRNA

Literature search
1 open access papers mention gma-MIR4389
(1 sentences)

Sequence

cggUCGGUCGGACCGAUCCAAUCGGAAucuaguggccuaaccagaucgguuuuacuauuggauugaucaugcaauuaaccuugaaugaccugaucaaacucggccgauuauguaucgaauuccaguuggaccgguccgacucggccg
(((((((((((((((.((((((.((((((((((((...((((.....))))...))))))).(((((((.(((.(((....))).)).).))))))).......((((.....)))).))))).)))))).))))))))).))))))

Structure
      -         A      C     cuaguggccuaaccagaucgguuuuacuauugga       u -  a   a 
cggUCG GUCGGACCG UCCAAU GGAAu                                  uugauca g ca uua c
|||||| ||||||||| |||||| |||||                                  ||||||| | || |||  
gccggc cagccuggc agguug ccuua                                  aacuagu c gu agu c
      u         c      a     -------------agcuauguauuagccggcuca       c a  a   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr13: 32881750-32881896 [-]

Database links

Mature gma-miR4389

Accession MIMAT0018302
Description Glycine max gma-miR4389 mature miRNA
Sequence 4 - UCGGUCGGACCGAUCCAAUCGGAA - 27
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20122185
    Prediction of novel miRNAs and associated target genes in Glycine max
    Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
    BMC Bioinformatics (2010) 11:S14