miRBase entry: gma-MIR4383

Stem-loop gma-MIR4383


Accession
MI0016531
Description
Glycine max gma-MIR4383 precursor miRNA
Gene family
MIPF0001306; MIR4354


Sequence

ggaccgguucaacugagauccgguaccuaaccgaucgauuuuaaucgaaucaucucagaucaauugugugaccgaucuaauauaaaacugauccaauuagguUAUUGGAUCUCAGUUGAACCGGUCu
((((((((((((((((((((((((((((((..(((((.(((((((((..((((..(((.....))).)))).))))......))))).)))))...))))).)))))))))))))))))))))))))

Structure
                         -     -cc     a     ------    aa    cu   a 
ggaccgguucaacugagauccggua ccuaa   gaucg uuuua      aucg  ucau  cag u
||||||||||||||||||||||||| |||||   ||||| |||||      ||||  ||||  ||| c
uCUGGCCAAGUUGACUCUAGGUUAU ggauu   cuagu aaaau      uagc  agug  guu a
                         u     aac     c     auaauc    -c    -u   a 


Annotation confidence Not enough data
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Genome context
chr2: 26866450-26866576 [+]

Database links

Mature gma-miR4383

Accession MIMAT0018290
Description Glycine max gma-miR4383 mature miRNA
Sequence 103 - UAUUGGAUCUCAGUUGAACCGGUC - 126
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20122185
    Prediction of novel miRNAs and associated target genes in Glycine max
    Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
    BMC Bioinformatics (2010) 11:S14