miRBase entry: gma-MIR4372a

Stem-loop gma-MIR4372a


Accession
MI0016516
Description
Glycine max gma-MIR4372a precursor miRNA
Gene family
MIPF0001257; MIR4372


Sequence

acguugaucaucauaugucauaauuuuacuggacguuaauuucauguauuuaauuaacgucaaucuauacaccuaauuaacgucaaccuccaaUAAAAUCGUGACAUGUGACGGUCAaugu
(((((((((.(((((((((((.((((((.((((((((((((...(((((.................)))))...))))))))......)))).)))))).))))))))))).)))))))))

Structure
         a           a      c    ------        uca     uuaauua 
acguugauc ucauaugucau auuuua ugga      cguuaauu   uguau       a
||||||||| ||||||||||| |||||| ||||      ||||||||   |||||       c
uguaACUGG AGUGUACAGUG UAAAAU accu      gcaauuaa   acaua       g
         C           C      a    ccaacu        ucc     ucuaacu 


Annotation confidence Not enough data
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Genome context
chr10: 49480492-49480612 [-]

Database links

Mature gma-miR4372a

Accession MIMAT0018275
Description Glycine max gma-miR4372a mature miRNA
Sequence 94 - UAAAAUCGUGACAUGUGACGGUCA - 117
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20122185
    Prediction of novel miRNAs and associated target genes in Glycine max
    Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
    BMC Bioinformatics (2010) 11:S14