miRBase entry: gma-MIR4341

Stem-loop gma-MIR4341


Accession
MI0016470
Description
Glycine max gma-MIR4341 precursor miRNA

Literature search
1 open access papers mention gma-MIR4341
(1 sentences)

Sequence

acccucaugugaaacuuucaacauauuucucuauuuagguguaaccacaccuucccucacacucaauagauucuuauauagauaaagagaUGUGUUGAAAGUUUAACAUGACGGgu
((((((((((.(((((((((((((((((((.(((((((((((....))))))...........................))))).))))))))))))))))))).)))))).))))

Structure
    -      g                   c     ---------------------------      a 
accc ucaugu aaacuuucaacauauuucu uauuu                           aggugu a
|||| |||||| ||||||||||||||||||| |||||                           ||||||  
ugGG AGUACA UUUGAAAGUUGUGUagaga auaga                           uccaca c
    C      A                   a     uauauucuuagauaacucacacucccu      c 


Annotation confidence Not enough data
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Genome context
chr6: 12004246-12004361 [-]

Database links

Mature gma-miR4341

Accession MIMAT0018229
Description Glycine max gma-miR4341 mature miRNA
Sequence 91 - UGUGUUGAAAGUUUAACAUGACGG - 114
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20122185
    Prediction of novel miRNAs and associated target genes in Glycine max
    Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
    BMC Bioinformatics (2010) 11:S14