miRBase entry: gma-MIR4340

Stem-loop gma-MIR4340


Accession
MI0016469
Description
Glycine max gma-MIR4340 precursor miRNA


Sequence

acaagcguguucugucuuggcagcugaaguuccgaauugcUGCAGAGAUAGGGACGCGCUUAcua
..((((((((((((((((.(((((..............))))).)))))).))))))))))....

Structure
--ac          -      g     ugaagu 
    aagcguguuc ugucuu gcagc      u
    |||||||||| |||||| |||||       
    UUCGCGCAGG AUAGAG CGUcg      c
aucA          G      A     uuaagc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr19: 2095404-2095468 [-]

Database links

Mature gma-miR4340

Accession MIMAT0018228
Description Glycine max gma-miR4340 mature miRNA
Sequence 41 - UGCAGAGAUAGGGACGCGCUUA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20122185
    Prediction of novel miRNAs and associated target genes in Glycine max
    Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
    BMC Bioinformatics (2010) 11:S14