Stem-loop tae-MIR395b

Accession

MI0016464

Description

Triticum aestivum tae-MIR395b precursor miRNA

Gene family

MIPF0000016; MIR395

Literature search

12 open access papers mention tae-MIR395b
(29 sentences)

Sequence

3055 reads, 36 reads per million, 114 experiments

cUGAAGUGUUUGGGGGAACUCuuggugucaccaagcauuuaguagacauuggccacauaucauaagagagaugcaucaaugggcugaauguuuggucuuaccauggguuccuugcaagcacuuc
..(((((((((((((((((((.(((((..((((((((((((((...((((((...(((.((......)).)))..)))))).))))))))))))))..))))).))))))))).))))))))))

Structure

cU          -         u     uc              aga      cca   a  au 
  GAAGUGUUUG GGGGAACUC uggug  accaagcauuuagu   cauugg   cau uc  a
  |||||||||| ||||||||| |||||  ||||||||||||||   ||||||   ||| ||   
  cuucacgaac uuccuuggg accau  ugguuuguaagucg   guaacu   gua ag  a
--          g         u     uc              --g      -ac   g  ag 

Annotation confidence Not enough data

Genome context

Unknown

Mature tae-miR395b

• Accession: MIMAT0018223
• Description: Triticum aestivum tae-miR395b mature miRNA
• Sequence: 2 - UGAAGUGUUUGGGGGAACUC - 21
• Evidence: not_experimental

References

1. PubMed ID: 18521122
   Data mining for miRNAs and their targets in the Triticeae
   "Dryanova A, Zakharov A, Gulick PJ"
   "Genome (2008) 51:433-443