miRBase entry: smr-mir-3930

Stem-loop smr-mir-3930


Accession
MI0016442
Description
Strigamia maritima smr-mir-3930 precursor miRNA

Literature search
1 open access papers mention smr-mir-3930
(1 sentences)

Sequence

uaaucgccuuugcuucACGGUUCUGUUACGGUGUAGAgggaauuacucaaaacuGUACGCCGUAGCAGAGUCGCUacgccagggcgagua
...(((((((.((....((((((((((((((((((.((..............)).))))))))))))))))))....)).)))))))...

Structure
uaa       u  uucA                  G  ggaauu 
   ucgccuu gc    CGGUUCUGUUACGGUGUA Ag      a
   ||||||| ||    |||||||||||||||||| ||       
   agcggga cg    GCUGAGACGAUGCCGCAU uc      c
aug       c  caUC                  G  aaaacu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature smr-miR-3930-5p

Accession MIMAT0018917
Description Strigamia maritima smr-miR-3930-5p mature miRNA
Sequence 17 - ACGGUUCUGUUACGGUGUAGA - 37
Evidence not_experimental

Mature smr-miR-3930-3p

Accession MIMAT0018918
Description Strigamia maritima smr-miR-3930-3p mature miRNA
Sequence 55 - GUACGCCGUAGCAGAGUCGCU - 75
Evidence not_experimental

References

  1. PubMed ID: 20702459
    A congruent solution to arthropod phylogeny: phylogenomics, microRNAs and morphology support monophyletic Mandibulata
    "Rota-Stabelli O, Campbell L, Brinkmann H, Edgecombe GD, Longhorn SJ, Peterson KJ, Pisani D, Philippe H, Telford MJ"
    "Proc Biol Sci (2011) 278:298-306