miRBase entry: hsa-mir-3150b

Stem-loop hsa-mir-3150b


Accession
MI0016426
Symbol
HGNC: MIR3150B
Description
Homo sapiens hsa-mir-3150b precursor miRNA
Gene family
MIPF0001102; mir-3150


Sequence

2770 reads, 54 reads per million, 49 experiments
gagggaaagcaggcCAACCUCGAGGAUCUCCCCAGCcuuggcguucaggugcUGAGGAGAUCGUCGAGGUUGGccugcuuccccuc
(((((.(((((((((((((((((.(((((((.((((((((.....)))).)))).))))))).))))))))))))))))).)))))

Structure
     a                 G       C    -    g 
gaggg aagcaggcCAACCUCGA GAUCUCC CAGC cuug c
||||| ||||||||||||||||| ||||||| |||| |||| g
cuccc uucguccGGUUGGAGCU CUAGAGG GUcg ggac u
     c                 G       A    u    u 


Annotation confidence Not enough data
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Genome context
chr8: 95072911-95072996 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from hsa-mir-3150b
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-3150b is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-3150b-3p

Accession MIMAT0018194
Description Homo sapiens hsa-miR-3150b-3p mature miRNA
Sequence 53 - UGAGGAGAUCGUCGAGGUUGG - 73
Evidence experimental
Illumina [1-3]
Database links
Predicted targets

Mature hsa-miR-3150b-5p

Accession MIMAT0019226
Description Homo sapiens hsa-miR-3150b-5p mature miRNA
Sequence 15 - CAACCUCGAGGAUCUCCCCAGC - 36
Evidence experimental
Illumina [2-3]
Database links
Predicted targets

References

  1. PubMed ID: 20224791
    Discovery of novel microRNAs in female reproductive tract using next generation sequencing
    Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
    PLoS One (2010) 5:e9637

  2. PubMed ID: 21199797
    Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
    "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
    "Cancer Res (2011) 71:78-86

  3. PubMed ID: 21606961
    Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia
    "Schotte D, Akbari Moqadam F, Lange-Turenhout EA, Chen C, van Ijcken WF, Pieters R, den Boer ML"
    "Leukemia (2011) 25:1389-1399