miRBase entry: tca-mir-3902

Stem-loop tca-mir-3902


Accession
MI0016402
Description
Tribolium castaneum tca-mir-3902 precursor miRNA


Sequence

ccgucauauaaccgugguuAUAUAACCGGCAUAUUACcaugguuauauaaccagcauauaaccaugguuAUAUAAUCGGCAUAUAACCaugguuauauaaccg
..((.((((((((((((((((((..((((.((((.(((((((((((((.......))))))))))))).))))..)))).)))))))))))))))))).))..

Structure
cc  c                  AA    -C    U             aa 
  gu auauaaccgugguuAUAU  CCGG  AUAU ACcaugguuauau  c
  || ||||||||||||||||||  ||||  |||| |||||||||||||  c
  ca uauauugguaCCAAUAUA  GGCU  UAUA ugguaccaauaua  a
gc  a                  -C    AA    u             cg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ChLG10: 3146124-3146226 [+]

Database links

Mature tca-miR-3902-5p

Accession MIMAT0018908
Description Tribolium castaneum tca-miR-3902-5p mature miRNA
Sequence 20 - AUAUAACCGGCAUAUUAC - 37
Evidence experimental
SOLID [1]
Database links

Mature tca-miR-3902-3p

Accession MIMAT0018909
Description Tribolium castaneum tca-miR-3902-3p mature miRNA
Sequence 70 - AUAUAAUCGGCAUAUAACC - 88
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696