Stem-loop sequence tca-mir-193

AccessionMI0016396 (change log)
DescriptionTribolium castaneum miR-193 stem-loop
Literature search

1 open access papers mention tca-mir-193
(1 sentences)

Stem-loop 
   -  aaa     --c     gg      c    -     u    ugaucau 
5'  gc   cuggu   guaau  uuuggg cuua uaggu cagu       u
    ||   |||||   |||||  |||||| |||| ||||| ||||       u
3'  cg   ggccg   cauua  gaaccc gaau guccg guca       u
   u  -aa     uua     uu      u    u     -    ucgaaau
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Tcas4.0) Overlapping transcripts
ChLG8: 4707070-4707166 [-]
intergenic
Clustered miRNAs
< 10kb from tca-mir-193
tca-mir-193ChLG8: 4707070-4707166 [-]
tca-mir-2788ChLG8: 4706940-4707035 [-]
Database links

Mature sequence tca-miR-193-5p

Accession MIMAT0018896
Sequence

21 -  

ugggccuuauagguucaguug

 - 41

Get sequence
Evidence experimental; SOLID [1]

Mature sequence tca-miR-193-3p

Accession MIMAT0018897
Sequence

56 -  

uacuggccuguuaagucccaagu

 - 78

Get sequence
Evidence experimental; SOLID [1]
Database links

References

1
PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).