miRBase entry: tca-mir-3855

Stem-loop tca-mir-3855


Accession
MI0016331
Description
Tribolium castaneum tca-mir-3855 precursor miRNA


Sequence

aguuuuuUUCGUCAGAUUUGUUAAAGGUUUCGCaauUAACGCGUAAUUUUUGGCAAAGUGACggaaauaucc
.....(((((((((..(((((((((((((.(((.......))).))))))))))))).))))))))).....

Structure
aguuu         GA             U   aa 
     uuUUCGUCA  UUUGUUAAAGGUU CGC  u
     |||||||||  ||||||||||||| |||  U
     aaaggCAGU  AAACGGUUUUUAA GCG  A
ccuau         -G             U   CA 


Annotation confidence Not enough data
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Genome context
ChLG6: 8753198-8753269 [+]

Database links

Mature tca-miR-3855-5p

Accession MIMAT0018766
Description Tribolium castaneum tca-miR-3855-5p mature miRNA
Sequence 8 - UUCGUCAGAUUUGUUAAAGGUUUCGC - 33
Evidence experimental
SOLID [1]
Database links

Mature tca-miR-3855-3p

Accession MIMAT0018767
Description Tribolium castaneum tca-miR-3855-3p mature miRNA
Sequence 37 - UAACGCGUAAUUUUUGGCAAAGUGAC - 62
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696