miRBase entry: mghv-mir-M1-11

Stem-loop mghv-mir-M1-11


Accession
MI0016251
Description
Mouse gammaherpesvirus 68 mghv-mir-M1-11 precursor miRNA


Sequence

gacAGCUGUCAGGGGUUACAUGagagaacuucaUGUAACCCCUGACAGCUGUC
((((((((((((((((((((((((.....))))))))))))))))))))))))

Structure
                        a 
gacAGCUGUCAGGGGUUACAUGag g
|||||||||||||||||||||||| a
CUGUCGACAGUCCCCAAUGUacuu a
                        c 


Annotation confidence Not enough data
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Genome context
U97553: 759-811 [+]
Clustered miRNAs
14 other miRNAs are < 10 kb from mghv-mir-M1-11
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mghv-miR-M1-11-5p

Accession MIMAT0018168
Description Mouse gammaherpesvirus 68 mghv-miR-M1-11-5p mature miRNA
Sequence 4 - AGCUGUCAGGGGUUACAUG - 22
Evidence experimental
454 [1]

Mature mghv-miR-M1-11-3p

Accession MIMAT0018169
Description Mouse gammaherpesvirus 68 mghv-miR-M1-11-3p mature miRNA
Sequence 34 - UGUAACCCCUGACAGCUGUC - 53
Evidence experimental
454 [1]

References

  1. PubMed ID: 20668074
    Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68
    "Zhu JY, Strehle M, Frohn A, Kremmer E, Hofig KP, Meister G, Adler H"
    "J Virol (2010) 84:10266-10275