Stem-loop sequence tgu-mir-192

Accession

MI0016247 (change log)

Description

Taeniopygia guttata miR-192 stem-loop

Literature search

2 open access papers mention tgu-mir-192
(3 sentences)

Stem-loop

   uuccccauc uc   --c    a    ccu   aauuaa       g 
5'          g  ucc   agca cuga   aug      cagaguu g
            |  |||   |||| ||||   |||      |||||||  
3'          c  agg   ucgu gacu   uau      guuuuag u
   -------ga ga   auu    c    --u   ccccuc       u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (taeGlu3.2.4): chr8: 22188980-22189064 [+]
• Overlapping transcripts:

  antisense

  ENSTGUT00000009431 ; COA7-201; intron 1

  ENSTGUT00000009551 ; SLC1A7-201; intron 3

Database links

• miRBase Tracker:MI0016247

Mature sequence tgu-miR-192

• Accession: MIMAT0018617
• Sequence: 22 - cugaccuaugaauuaacagag - 42
• Evidence: not experimental

References

1. PMID:21627805 "Song exposure regulates known and novel microRNAs in the zebra finch auditory forebrain" Gunaratne PH, Lin YC, Benham AL, Drnevich J, Coarfa C, Tennakoon JB, Creighton CJ, Kim JH, Milosavljevic A, Watson M, Griffiths-Jones S, Clayton DF BMC Genomics. 12:277(2011).