Stem-loop sequence tgu-mir-25

Accession

MI0016246 (change log)

Description

Taeniopygia guttata miR-25 stem-loop

Literature search

3 open access papers mention tgu-mir-25
(6 sentences)

Stem-loop

   --------ccc     -   - ag       --aaugg      u 
5'            gagca gua c  gggacag       gggcug g
              ||||| ||| |  |||||||       ||||||  
3'            cuugu cau g  cucuguu       cuugac g
   gguugcuucua     u   c -g       cacguua      u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (taeGlu3.2.4): chr2: 142309692-142309770 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0016246

Mature sequence tgu-miR-25

• Accession: MIMAT0018616
• Sequence: 42 - cauugcacuugucucggcuacu - 63
• Evidence: not experimental

References

1. PMID:21627805 "Song exposure regulates known and novel microRNAs in the zebra finch auditory forebrain" Gunaratne PH, Lin YC, Benham AL, Drnevich J, Coarfa C, Tennakoon JB, Creighton CJ, Kim JH, Milosavljevic A, Watson M, Griffiths-Jones S, Clayton DF BMC Genomics. 12:277(2011).