Stem-loop sequence ame-mir-3739

Accession

MI0016238 (change log)

Description

Apis mellifera miR-3739 stem-loop

Stem-loop

   ----------c    aauc  c  - ga      g     c    a  aau      cu 
5'            uucu    gc gc c  uccucc cccga gagg uc   uucuau  c
              ||||    || || |  |||||| ||||| |||| ||   ||||||  u
3'            aaga    cg cg g  aggggg ggguu uuuc ag   gaggug  a
   uaauaagcuca    ccgu  a  a ag      a     u    a  --g      cg 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (AMEL4.5; GCA_000002195.1): CM000056.5: 14316213-14316320 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir3739
• RNAcentral:URS000075C45E_7460
• miRBase Tracker:MI0016238

Mature sequence ame-miR-3739-3p

• Accession: MIMAT0018608
• Sequence: 69 - uugggagggggagagagcagcu - 90
• Evidence: experimental; SOLID [1], Illumina [2]

References

1. PMID:20807255 "Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera" Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F Insect Mol Biol. 19:799-805(2010).
2. PMID:26853694 "MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)" Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL Insect Mol Biol. 25:216-226(2016).