Stem-loop ame-mir-3728

Accession

MI0016225

Description

Apis mellifera ame-mir-3728 precursor miRNA

Literature search

0 open access papers mention ame-mir-3728
(0 sentences)

Sequence

gagcgcgcgugucuauuaguagcgguaaCCAUCCGUGGGAUUCGUAAUUUAguuucuaguuuaucuuggaucgaagguaggauacgauucgcggccgcgaaggcguaaauacaggcgua
..((((..((((.(((.....((((.......(((((((..(((((.((((.((((..(((((...))))).)))).)))).))))))))))))))))......))).))))..)))).

Structure

ga    gc    c   -uagua    uaaCCAU       AU     A    g    ua     u 
  gcgc  gugu uau      gcgg       CCGUGGG  UCGUA UUUA uuuc  guuua  
  ||||  |||| |||      ||||       |||||||  ||||| |||| ||||  ||||| c
  ugcg  caua aug      cgcc       ggcgcuu  agcau ggau gaag  uaggu  
-a    ga    a   cggaag    -------       --     a    g    -c     u 

Annotation confidence Not enough data

Genome context

CM000060.5: 12048501-12048619 [+]

Mature ame-miR-3728-5p

• Accession: MIMAT0018595
• Description: Apis mellifera ame-miR-3728-5p mature miRNA
• Sequence: 29 - CCAUCCGUGGGAUUCGUAAUUUA - 51
• Evidence: experimental ; SOLID [1], Illumina [2]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805


2. PubMed ID: 26853694
   MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
   "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
   "Insect Mol Biol (2016) 25:216-226