Stem-loop sequence ame-mir-3796

Accession

MI0016211 (change log)

Description

Apis mellifera miR-3796 stem-loop

Stem-loop

   u  -  -   ----g      a          --g     g   ------    a   -uua      a 
5'  cc au cgu     acgaau uucuucucuc   gggau cga      cucg gag    ucgggu a
    || || |||     |||||| ||||||||||   ||||| |||      |||| |||    |||||| u
3'  gg ua gca     uguuua gagaggaggg   uccua gcu      gagu uuc    gguucg u
   u  c  u   guuaa      g          gaa     -   uaguuu    a   uuug      a 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (AMEL4.5; GCA_000002195.1): CM000069.5: 775446-775570 [+]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir3796
• miRBase Tracker:MI0016211

Mature sequence ame-miR-3796-3p

• Accession: MIMAT0018581
• Sequence: 85 - gauccuaaggggaggagaggauuu - 108
• Evidence: experimental; SOLID [1]

References

1. PMID:20807255 "Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera" Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F Insect Mol Biol. 19:799-805(2010).