Stem-loop sequence ame-mir-3787

Accession

MI0016196 (change log)

Description

Apis mellifera miR-3787 stem-loop

Stem-loop

   c      c      uagggaa      -aa     --uc    -----   -    -   aaac      a  a 
5'  aucacg guuaua       ucgaua   acgag    gagc     uug ugug ugg    guucua ca c
    |||||| ||||||       ||||||   |||||    ||||     ||| |||| |||    |||||| ||  
3'  uagugc caaugu       agcuau   uguuu    uucg     aac gcgc acc    caaggu gu a
   u      c      uuuggac      aaa     uaac    uuaaa   u    g   -aaa      -  u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (AMEL4.5; GCA_000002195.1): CM000065.5: 5148158-5148295 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir3787
• RNAcentral:URS000075AE7C_7460
• miRBase Tracker:MI0016196

Mature sequence ame-miR-3787-5p

• Accession: MIMAT0018566
• Sequence: 32 - gagucgagcuuguguguggaa - 52
• Evidence: experimental; SOLID [1]

References

1. PMID:20807255 "Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera" Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F Insect Mol Biol. 19:799-805(2010).