miRBase entry: ame-mir-3768

Stem-loop ame-mir-3768


Accession
MI0016172
Description
Apis mellifera ame-mir-3768 precursor miRNA


Sequence

gcgcugugcgggaaagucuugggcuuuaugggggugaucaacaugugcucgguccaggaggucuCCAACGACGGUCUCUCCAACCGUu
..((((((..(((...(((((((((....(.(.(((.....))).).)..)))))))))....)))..).))))).............

Structure
-----------gc     - cg   -aag         uuau g g   a 
             gcugu g  gga    ucuugggcu    g g gug u
             ||||| |  |||    |||||||||    | | ||| c
             UGGCA C  CCu    aggaccugg    c u uac a
uUGCCAACCUCUC     G AA   cugg         --cu g g   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
CM000054.5: 938580-938667 [+]

Database links

Mature ame-miR-3768-3p

Accession MIMAT0018542
Description Apis mellifera ame-miR-3768-3p mature miRNA
Sequence 65 - CCAACGACGGUCUCUCCAACCGU - 87
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805