Stem-loop sequence ame-mir-3720

Accession

MI0016168 (change log)

Description

Apis mellifera miR-3720 stem-loop

Stem-loop

   cu           --    -----    g    -aaca      ---acccg       uuu   uc  a     au 
5'   gagguucauac  ggug     auga uuua     guuuac        agucugg   cga  ga ccuca  u
     |||||||||||  ||||     |||| ||||     ||||||        |||||||   |||  || |||||   
3'   cuucaaguaug  ucgc     uacu agau     caaaug        uuagacc   gcu  cu ggggu  u
   --           ag    auuga    g    guuug      agaaagua       -uu   --  a     cu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (AMEL4.5; GCA_000002195.1): CM000059.5: 7680289-7680428 [+]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir3720
• RNAcentral:URS000075DC48_7460
• miRBase Tracker:MI0016168

Mature sequence ame-miR-3720-5p

• Accession: MIMAT0018538
• Sequence: 10 - auacggugaugaguuuaaacag - 31
• Evidence: experimental; SOLID [1]

References

1. PMID:20807255 "Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera" Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F Insect Mol Biol. 19:799-805(2010).