miRBase entry: ame-mir-3747a

Stem-loop ame-mir-3747a


Accession
MI0016145
Description
Apis mellifera ame-mir-3747a precursor miRNA
Gene family
MIPF0001223; mir-3747


Sequence

ggccugCGAGGCUUUUUUUCAGCGAUGAauaaaaauauuguucaucguuggaaaaaagucuuggaga
...((.((((((((((((((((((((((((((.....)))))))))))))))))))))))))).)).

Structure
ggc  g                          a 
   cu CGAGGCUUUUUUUCAGCGAUGAauaa a
   || |||||||||||||||||||||||||| a
   ga guucugaaaaaagguugcuacuuguu u
--a  g                          a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
CM000061.5: 13107663-13107729 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ame-mir-3747a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ame-miR-3747a-5p

Accession MIMAT0018515
Description Apis mellifera ame-miR-3747a-5p mature miRNA
Sequence 7 - CGAGGCUUUUUUUCAGCGAUGA - 28
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805