Stem-loop sequence ame-mir-3717

Accession

MI0016142 (change log)

Description

Apis mellifera miR-3717 stem-loop

Stem-loop

   uug   a  ug  a      -      g   --g  ug g c    g 
5'    gag gg  ag gaaaaa gagagu ucg   gg  g a guuu a
      ||| ||  || |||||| |||||| |||   ||  | | ||||  
3'    uuc cu  uc cuuuuu cucuua agc   cu  c u uaaa u
   --g   g  gu  -      a      -   aca  gu g -    a 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (AMEL4.5; GCA_000002195.1): CM000059.5: 4741881-4741968 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir3717
• RNAcentral:URS000075B663_7460
• miRBase Tracker:MI0016142

Mature sequence ame-miR-3717-5p

• Accession: MIMAT0018512
• Sequence: 10 - ugagagaaaaagagagugucgg - 31
• Evidence: experimental; SOLID [1], Illumina [2]

References

1. PMID:20807255 "Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera" Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F Insect Mol Biol. 19:799-805(2010).
2. PMID:26853694 "MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)" Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL Insect Mol Biol. 25:216-226(2016).