miRBase entry: hsa-mir-3688-1

Stem-loop hsa-mir-3688-1


Accession
MI0016089
Symbol
HGNC: MIR3688-1
Description
Homo sapiens hsa-mir-3688-1 precursor miRNA
Gene family
MIPF0001263; mir-3688


Sequence

359 reads, 1524 reads per million, 59 experiments
ucuucacuuucaagAGUGGCAAAGUCUUUCCAUAUguauguauguaugucuguuacacaUAUGGAAAGACUUUGCCACUCUuuaaagugaaga
((((((((((.((((((((((((((((((((((((((..(((...........))))))))))))))))))))))))))))).))))))))))

Structure
          c                          au   ugua 
ucuucacuuu aagAGUGGCAAAGUCUUUCCAUAUgu  gua    u
|||||||||| ||||||||||||||||||||||||||  |||    g
agaagugaaa uUCUCACCGUUUCAGAAAGGUAUaca  cau    u
          u                          --   uguc 


Annotation confidence High
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Genome context
chr4: 159128802-159128894 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from hsa-mir-3688-1
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-3688-1 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-3688-3p

Accession MIMAT0018116
Description Homo sapiens hsa-miR-3688-3p mature miRNA
Sequence 60 - UAUGGAAAGACUUUGCCACUCU - 81
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature hsa-miR-3688-5p

Accession MIMAT0019223
Description Homo sapiens hsa-miR-3688-5p mature miRNA
Sequence 15 - AGUGGCAAAGUCUUUCCAUAU - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20459673
    Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood
    Vaz C, Ahmad HM, Sharma P, Gupta R, Kumar L, Kulshreshtha R, Bhattacharya A
    BMC Genomics (2010) 11:288

  2. PubMed ID: 21199797
    Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
    "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
    "Cancer Res (2011) 71:78-86