Stem-loop sequence hsa-mir-3670-1

Accession

MI0016071 (change log)

Previous IDs

hsa-mir-3670

Symbol

HGNC:MIR3670-1

Description

Homo sapiens miR-3670-1 stem-loop

Gene family

MIPF0001340; mir-3670

Stem-loop

         -cu  u       cuuuug    -    c 
5' ucuaga   gg auagcug      gagc cuca c
   ||||||   || |||||||      |||| |||| u
3' agaucu   cc ugucgac      cucg gagu g
         cuu  -       -----a    a    c 

Deep sequencing

16 reads, 0 reads per million, 13 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr16: 14907717-14907781 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from hsa-mir-3670-1

• hsa-mir-3179-1: chr16: 14901508-14901591 [+]
• hsa-mir-3670-1: chr16: 14907717-14907781 [+]
• hsa-mir-3180-1: chr16: 14911220-14911313 [+]

Database links

• EntrezGene:MIR3670
• HGNC:MIR3670-1
• miRBase Tracker:MI0016071

Mature sequence hsa-miR-3670

• Accession: MIMAT0018093
• Sequence: 40 - agagcucacagcuguccuucucua - 63
• Deep sequencing: 44 reads, 10 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:20459673 "Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood" Vaz C, Ahmad HM, Sharma P, Gupta R, Kumar L, Kulshreshtha R, Bhattacharya A BMC Genomics. 11:288(2010).