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miRBase |
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Stem-loop sequence vvi-MIR3639 |
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Accession | MI0016039 (change log) | ||||
Description | Vitis vinifera miR3639 stem-loop | ||||
Literature search |
2 open access papers mention vvi-MIR3639 | ||||
Stem-loop |
u uc u -- auacacga g cg c a - a aa 5' gu caaaagc uug uga auaacaaug u aagcuu uuauaaaaaaa uuuuaa accu guuuggauugacuucuga aggcuaaaagcucuuauu g || ||||||| ||| ||| ||||||||| | |||||| ||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||||| c 3' ca guuuucg aac acu uauuguugc a uuugaa aauauuuuuuu aaaauu ugga caaaccuaacugaagacu uucgguuuucgagaauaa u u -c u au ------aa g au - c a c au |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence vvi-miR3639-5p |
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Accession | MIMAT0018051 |
Previous IDs | vvi-miR3639 |
Sequence |
76 - auugacuucugaaaggcuaaaagc - 99 |
Deep sequencing | 17 reads, 2 experiments |
Evidence | experimental; Illumina [1] |
Mature sequence vvi-miR3639-3p |
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Accession | MIMAT0018052 |
Previous IDs | vvi-miR3639* |
Sequence |
119 - gagcuuuuggcuucucagaaguca - 142 |
Deep sequencing | 25 reads, 2 experiments |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:20230504
"Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis"
Plant J. 62:960-976(2010).
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