Stem-loop sequence vvi-MIR3638

AccessionMI0016038 (change log)
DescriptionVitis vinifera miR3638 stem-loop
Literature search

2 open access papers mention vvi-MIR3638
(3 sentences)

Stem-loop 
             a            c         -                   g                      c                   auauau 
5' auauaaugau aauaauaaacug uguaacuac uuuauuuuuuguuugccuu ggugcuuuggugugccuuuucg gcuuguugcuaauauauau      a
   |||||||||| |||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||       
3' uauauuacua uuauuauuugac acauugaug aaauaaaaaacaaacggga ccacgaaaccacacggaaaagu cgaacaacgauuauauaua      g
             c            a         g                   g                      a                   aaaacg
Get sequence
Deep sequencing
57 reads, 0 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (12X; GCA_000003745.2) Overlapping transcripts
chr17: 7119929-7120133 [-]
intergenic
Database links

Mature sequence vvi-miR3638-5p

Accession MIMAT0018049
Previous IDsvvi-miR3638*
Sequence

64 -  

ugugccuuuucgcgcuuguugcua

 - 87

Get sequence
Deep sequencing7 reads, 2 experiments
Evidence experimental; Illumina [1]

Mature sequence vvi-miR3638-3p

Accession MIMAT0018050
Previous IDsvvi-miR3638
Sequence

120 -  

gcaacaagcaugaaaaggcacacc

 - 143

Get sequence
Deep sequencing6 reads, 2 experiments
Evidence experimental; Illumina [1]

References

1
PMID:20230504 "Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis" Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J Plant J. 62:960-976(2010).