Stem-loop sequence vvi-MIR3636

AccessionMI0016036 (change log)
DescriptionVitis vinifera miR3636 stem-loop
Literature search

2 open access papers mention vvi-MIR3636
(5 sentences)

Stem-loop 
              uc  aua         gu                 u      ---u     aug       g 
5' uaauuuauuug  ga   gacucuucg  uugcuucuuugauagau caguga    auguc   uaauuuu u
   |||||||||||  ||   |||||||||  ||||||||||||||||| ||||||    |||||   |||||||  
3' guuaaguagac  cu   cugagaggc  aacgaagaggcugucug gucauu    uacag   auuaaaa u
              uu  ---         ug                 u      uauu     -ga       c
Get sequence
Deep sequencing
88254 reads, 5.8e+03 reads per million, 2 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (12X; GCA_000003745.2) Overlapping transcripts
chr16: 5414826-5414966 [-]
intergenic
Database links

Mature sequence vvi-miR3636-5p

Accession MIMAT0018045
Previous IDsvvi-miR3636*
Sequence

25 -  

ucgguuugcuucuuugauagauuc

 - 48

Get sequence
Deep sequencing13 reads, 2 experiments
Evidence experimental; Illumina [1]

Mature sequence vvi-miR3636-3p

Accession MIMAT0018046
Previous IDsvvi-miR3636
Sequence

99 -  

gucugucggagaagcaagucggag

 - 122

Get sequence
Deep sequencing88221 reads, 2 experiments
Evidence experimental; Illumina [1]

References

1
PMID:20230504 "Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis" Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J Plant J. 62:960-976(2010).