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miRBase |
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Stem-loop sequence vvi-MIR3633a |
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Accession | MI0016032 (change log) | |||||||
Description | Vitis vinifera miR3633a stem-loop | |||||||
Gene family | MIPF0000403; MIR482 | |||||||
Literature search |
2 open access papers mention vvi-MIR3633a | |||||||
Stem-loop |
u ugaau aa - a - ag ccucuuaua u uc 5' gaaa gggaga auuucgaaagc uagg aaugg uggu uaggag aacu uauuucu caucuuc c |||| |||||| ||||||||||| |||| ||||| |||| |||||| |||| ||||||| ||||||| 3' cuuu cccucu uaaagcuuuug aucc uuacc acca auccuu uuga gugaagg guagagg g u ---uu gc c c u gg --------c u cc |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence vvi-miR3633a-5p |
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Accession | MIMAT0018037 |
Previous IDs | vvi-miR3633a |
Sequence |
32 - ggaauggaugguuaggagag - 51 |
Deep sequencing | 13011 reads, 2 experiments |
Evidence | experimental; Illumina [1] |
Mature sequence vvi-miR3633a-3p |
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Accession | MIMAT0018038 |
Previous IDs | vvi-miR3633a* |
Sequence |
108 - uuccuauaccacccauucccua - 129 |
Deep sequencing | 4208 reads, 2 experiments |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:20230504
"Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis"
Plant J. 62:960-976(2010).
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