Stem-loop sequence vvi-MIR3631c

AccessionMI0016029 (change log)
DescriptionVitis vinifera miR3631c stem-loop
Gene family MIPF0001100; MIR3631
Literature search

2 open access papers mention vvi-MIR3631c
(4 sentences)

Stem-loop 
       u         c    uuu  u      uuu      uaa   cuaauaaauaua    u           u       uc     -au      c          -gacu    a                  a      c            a c    c c   a   u 
5' uaga aaauaaaug aaau   ag aaguac   ucuuaa   guu            aauu aggugguguuu uuuuuug  ugaau   aaaaga uaaaauauuu     uuuu uauuuaguuaaaaguaac uguuga aucauccaauau a uaaa u aac uau a
   |||| ||||||||| ||||   || ||||||   ||||||   |||            |||| ||||||||||| |||||||  |||||   |||||| ||||||||||     |||| |||||||||||||||||| |||||| |||||||||||| | |||| | ||| ||| a
3' auuu uuuauuuau uuua   uc uuuaug   agaauu   caa            uuaa uccaccauaaa aaaaaac  acuua   uuuuuu guuuuauaaa     aaaa auaagucaauuuucauug acaacu uaguagguuaua u auuu a uug aua u
       u         u    --u  u      --u      uac   ------------    u           c       ua     auc      a          aucau    a                  a      a            c a    c c   a   a
Get sequence
Deep sequencing
533 reads, 0 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
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Database links

Mature sequence vvi-miR3631c

Accession MIMAT0018033
Sequence

135 -  

cauguugacaucauccaauaua

 - 156

Get sequence
Deep sequencing121 reads, 2 experiments
Evidence experimental; Illumina [1]

References

1
PMID:20230504 "Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis" Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J Plant J. 62:960-976(2010).