Stem-loop sequence vvi-MIR3627

AccessionMI0016020 (change log)
DescriptionVitis vinifera miR3627 stem-loop
Gene family MIPF0001471; MIR3627
Literature search

1 open access papers mention vvi-MIR3627
(1 sentences)

Stem-loop 
   ga   aaa    -   a --aa           -    u                a    ac     -      uag 
5'   agg   gcga gaa g    agagggguugg gggu ucuugucgcaggagag cggc  uugcu cuugug   c
     |||   |||| ||| |    ||||||||||| |||| |||||||||||||||| ||||  ||||| ||||||    
3'   ucc   cgcu cuu c    uuucuucgacu ccca agaacaguguccucuc gccg  aacgg gaacgu   a
   ca   ---    u   a aucc           u    u                -    cu     c      uaa
Get sequence
Deep sequencing
4 reads, 0 reads per million, 1 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (12X; GCA_000003745.2) Overlapping transcripts
chr14: 28302547-28302693 [-]
intergenic
Database links

Mature sequence vvi-miR3627-5p

Accession MIMAT0018017
Previous IDsvvi-miR3627
Sequence

38 -  

uugucgcaggagagacggcacu

 - 59

Get sequence
Deep sequencing2 reads, 1 experiments
Evidence experimental; Illumina [1]

Mature sequence vvi-miR3627-3p

Accession MIMAT0018018
Previous IDsvvi-miR3627*
Sequence

90 -  

ucgccgcucuccugugacaag

 - 110

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:20230504 "Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis" Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J Plant J. 62:960-976(2010).