Stem-loop sequence vvi-MIR3626

Accession

MI0016019 (change log)

Description

Vitis vinifera miR3626 stem-loop

Literature search

1 open access papers mention vvi-MIR3626
(2 sentences)

Stem-loop

               a                               a   c 
5' gccuucaccggu gucgcugugaaauugaaguauaguuugcgcu uuc a
   |||||||||||| ||||||||||||||||||||||||||||||| |||  
3' cggaagugguca cagcgacacuuuaacuucauaucaaacguga agg a
               c                               c   u 

Deep sequencing

108 reads, 0 reads per million, 2 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Database links

• miRBase Tracker:MI0016019

Mature sequence vvi-miR3626-5p

• Accession: MIMAT0018015
• Previous IDs: vvi-miR3626
• Sequence: 10 - gguagucgcugugaaauugaa - 30
• Deep sequencing: 72 reads, 2 experiments
• Evidence: experimental; Illumina [1]

Mature sequence vvi-miR3626-3p

• Accession: MIMAT0018016
• Previous IDs: vvi-miR3626*
• Sequence: 70 - cuucaauuucacagcgaccac - 90
• Deep sequencing: 27 reads, 2 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:20230504 "Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis" Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J Plant J. 62:960-976(2010).