miRBase entry: hsa-mir-3616

Stem-loop hsa-mir-3616


Accession
MI0016006
Symbol
HGNC: MIR3616
Description
Homo sapiens hsa-mir-3616 precursor miRNA

Literature search
1 open access papers mention hsa-mir-3616
(1 sentences)

Sequence

197 reads, 51 reads per million, 37 experiments
ugucacuccgccagcaucAUGAAGUGCACUCAUGAUAUGUuugccccaucagcgugucaCGAGGGCAUUUCAUGAUGCAGGCgggguuggca
((((((((((((.((((((((((((((.(((.(((((((((.........))))))))).))).)))))))))))))).))))))).)))))

Structure
     -       a              A   A         ugc 
uguca cuccgcc gcaucAUGAAGUGC CUC UGAUAUGUu   c
||||| ||||||| |||||||||||||| ||| |||||||||   c
acggu ggggCGG CGUAGUACUUUACG GAG acugugcga   c
     u       A              G   C         cua 


Annotation confidence High
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Genome context
chr20: 47166967-47167058 [+]

Database links

Mature hsa-miR-3616-5p

Accession MIMAT0017995
Description Homo sapiens hsa-miR-3616-5p mature miRNA
Sequence 19 - AUGAAGUGCACUCAUGAUAUGU - 40
Evidence experimental
Illumina [1]

Mature hsa-miR-3616-3p

Accession MIMAT0017996
Description Homo sapiens hsa-miR-3616-3p mature miRNA
Sequence 60 - CGAGGGCAUUUCAUGAUGCAGGC - 82
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20459774
    Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls
    Witten D, Tibshirani R, Gu SG, Fire A, Lui WO
    BMC Biol (2010) 8:58