Stem-loop bta-mir-3604-1

Accession

MI0015950

Description

Bos taurus bta-mir-3604-1 precursor miRNA

Gene family

MIPF0001050; mir-3604

Literature search

1 open access papers mention bta-mir-3604-1
(1 sentences)

Sequence

309187 reads, 3 reads per million, 67 experiments

cccagccUAACCAAUGUGCAGACUACUGUacacauucagagcccccugaacagguagucugaacacuggguuggcggg
(((.(((...(((.(((.(((((((((.......(((((......)))))..))))))))).))).)))...))))))

Structure

   a   UAA   A   G         GUacaca     ag 
ccc gcc   CCA UGU CAGACUACU       uucag  c
||| |||   ||| ||| |||||||||       |||||   
ggg cgg   ggu aca gucugaugg       aaguc  c
   -   uug   c   a         -----ac     cc 

Annotation confidence Not enough data

Genome context

chr7: 16580960-16581037 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-3604-1

Mature bta-miR-3604

• Accession: MIMAT0016939
• Description: Bos taurus bta-miR-3604 mature miRNA
• Sequence: 8 - UAACCAAUGUGCAGACUACUGU - 29
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19765282
   Identification and characterization of miRNAs expressed in the bovine ovary
   Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D
   BMC Genomics (2009) 10:443