miRBase entry: bmo-mir-92a

Stem-loop bmo-mir-92a


Accession
MI0015936
Description
Bombyx mori bmo-mir-92a precursor miRNA
Gene family
MIPF0000013; mir-25

Literature search
5 open access papers mention bmo-mir-92a
(18 sentences)

Sequence

87 reads, 22 reads per million, 3 experiments
ggcccguuuggcugggcagugacuggcgccauauucgguacgugugcgaUAUUGCACCAGUCCCGGCCUAUccgagcgggc
.((((((((((.(((((.(.((((((.((.((((.((.........)))))).)).)))))).).))))).))))))))))

Structure
g          c     a u      c  c    u  gua 
 gcccguuugg ugggc g gacugg gc auau cg   c
 |||||||||| ||||| | |||||| || |||| ||   g
 cgggcgagcc AUCCG C CUGACC CG UAUa gc   u
-          U     G C      A  U    -  gug 


Annotation confidence Not enough data
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Genome context
NW_004581739.1: 696247-696327 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-92a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-92a

Accession MIMAT0016927
Description Bombyx mori bmo-miR-92a mature miRNA
Sequence 50 - UAUUGCACCAGUCCCGGCCUAU - 71
Evidence not_experimental
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148