Stem-loop sequence ssc-mir-4334

AccessionMI0015921 (change log)
DescriptionSus scrofa miR-4334 stem-loop
Literature search

5 open access papers mention ssc-mir-4334
(7 sentences)

   --cu   cu    -       u        ---  aa 
5'     gug  gagc ccuggag gacggggg   ug  a
       |||  |||| ||||||| ||||||||   ||   
3'     uac  cucg ggaccuc cugucccu   ac  g
   ggug   cc    a       -        gag  gg 
Get sequence
Deep sequencing
11691 reads, 1.59e+03 reads per million, 15 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Sscrofa10.2; GCA_000003025.4) Overlapping transcripts
chr15: 134433005-134433073 [+]
ENSSSCT00000017661 ; DNPEP-201; intron 12
Database links

Mature sequence ssc-miR-4334-5p

Accession MIMAT0017966
Previous IDsssc-miR-4334

11 - 


 - 29

Get sequence
Evidence experimental; Illumina [1]

Mature sequence ssc-miR-4334-3p

Accession MIMAT0020366

41 - 


 - 60

Get sequence
Deep sequencing11691 reads, 15 experiments
Evidence experimental; Illumina [2-3]


PMID:20433717 "Deciphering the porcine intestinal microRNA transcriptome" Sharbati S, Friedlander MR, Sharbati J, Hoeke L, Chen W, Keller A, Stahler PF, Rajewsky N, Einspanier R BMC Genomics. 11:275(2010).
PMID:21312241 "MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing" Li G, Li Y, Li X, Ning X, Li M, Yang G J Cell Biochem. 112:1318-1328(2011).
PMID:24499489 "Exploration of microRNAs in porcine milk exosomes" Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL BMC Genomics. 15:100(2014).