Stem-loop sequence hsa-mir-4284

Accession

MI0015893 (change log)

Symbol

HGNC:MIR4284

Description

Homo sapiens miR-4284 stem-loop

Literature search

8 open access papers mention hsa-mir-4284
(41 sentences)

Stem-loop

   ---g      ga       -ac  c     --a  aaa    g 
5'     uucugu  ggggcuc   au acccc   uc   gugg g
       ||||||  |||||||   || |||||   ||   ||||  
3'     gagaua  uuucgag   ug ugggg   ag   uacu a
   ggcg      -g       gau  a     gag  ggg    c 

Deep sequencing

6100 reads, 22.4 reads per million, 125 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr7: 73711317-73711397 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000252555 ; CLIP2-001; intron 1

  ENST00000361545 ; CLIP2-001; intron 1

  ENST00000223398 ; CLIP2-201; intron 1

Database links

• EntrezGene:MIR4284
• HGNC:MIR4284
• RNAcentral:URS000075D09B_9606
• miRBase Tracker:MI0015893

Mature sequence hsa-miR-4284

• Accession: MIMAT0016915
• Sequence: 11 - gggcucacaucaccccau - 28
• Deep sequencing: 6098 reads, 130 experiments
• Evidence: experimental; SOLiD [1]
• Database links:
  • RNAcentral:URS00001FC26E_9606
• Predicted targets:
  • TargetMiner:hsa-miR-4284
  • TargetScanVert:hsa-miR-4284
  • miRDB:hsa-miR-4284
  • microrna.org:hsa-miR-4284

References

1. PMID:19784364 "Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors" Goff LA, Davila J, Swerdel MR, Moore JC, Cohen RI, Wu H, Sun YE, Hart RP PLoS One. 4:e7192(2009).