Stem-loop sequence hsa-mir-4306

Accession

MI0015836 (change log)

Symbol

HGNC:MIR4306

Description

Homo sapiens miR-4306 stem-loop

Literature search

5 open access papers mention hsa-mir-4306
(5 sentences)

Stem-loop

   -aa  -u     g  u    agag          -  -  ccuaaccc 
5'    gc  gcuua ug ccuu    ucuccagagg ca uc        a
      ||  ||||| || ||||    |||||||||| || ||         
3'    ug  uggau ac ggaa    agaggucucc gu ag        g
   cca  uc     g  -    --ag          u  c  uuuucuaa 

Deep sequencing

30328 reads, 136 reads per million, 101 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr13: 99643059-99643149 [+]
• Overlapping transcripts:

  antisense

  OTTHUMT00000045567 ; DOCK9-002; intron 1

  OTTHUMT00000045568 ; DOCK9-003; intron 1

  ENST00000427887 ; DOCK9-002; intron 1

  ENST00000479769 ; DOCK9-003; intron 1

  ENST00000339416 ; DOCK9-201; intron 1

  ENST00000448493 ; DOCK9-203; intron 1

Database links

• EntrezGene:MIR4306
• HGNC:MIR4306
• RNAcentral:URS000075A81F_9606
• miRBase Tracker:MI0015836

Mature sequence hsa-miR-4306

• Accession: MIMAT0016858
• Sequence: 65 - uggagagaaaggcagua - 81
• Deep sequencing: 30316 reads, 118 experiments
• Evidence: experimental; SOLiD [1]
• Database links:
  • RNAcentral:URS00006097A6_9606
• Predicted targets:
  • TargetMiner:hsa-miR-4306
  • TargetScanVert:hsa-miR-4306
  • miRDB:hsa-miR-4306
  • microrna.org:hsa-miR-4306

References

1. PMID:19784364 "Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors" Goff LA, Davila J, Swerdel MR, Moore JC, Cohen RI, Wu H, Sun YE, Hart RP PLoS One. 4:e7192(2009).