Stem-loop aly-MIR4237

Accession

MI0015799

Description

Arabidopsis lyrata aly-MIR4237 precursor miRNA

Sequence

aaagacuguucuaugacaucgauuauauguuuacguuuguuuuuacguuaacauguaauaauaguuugcuauaaacguaaaaacAAACGUAAACAUAUAUAAUCGAugucauaaaacuauauuuac
.......(((.((((((((((((((((((((((((((((((((((((((.....((((.......))))....))))))))))))))))))))))))))..)))))))))))).))).........

Structure

--aaagacu   c            --                          aacau    ua 
         guu uaugacaucgau  uauauguuuacguuuguuuuuacguu     guaa  a
         ||| ||||||||||||  ||||||||||||||||||||||||||     ||||  u
         caa auacuguAGCUA  AUAUACAAAUGCAAAcaaaaaugcaa     cguu  a
cauuuauau   a            AU                          -auau    ug 

Annotation confidence Not enough data

Genome context

GL348716.1: 2528975-2529100 [-]

Mature aly-miR4237

• Accession: MIMAT0017926
• Description: Arabidopsis lyrata aly-miR4237 mature miRNA
• Sequence: 85 - AAACGUAAACAUAUAUAAUCGA - 106
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20407023
   Arabidopsis lyrata small RNAs: transient MIRNA and small interfering RNA loci within the Arabidopsis genus
   "Ma Z, Coruh C, Axtell MJ"
   "Plant Cell (2010) 22:1090-1103