Stem-loop aly-MIR4225

Accession

MI0015786

Description

Arabidopsis lyrata aly-MIR4225 precursor miRNA

Sequence

accaaaucauguuuauuuuaGAAUCGAUGGUUAAACAACACauuuugacgacaaauuuuggcgacuaucaguuauauuuucgaguuaugauuuuugucacucaaauguguucuuuaauucaucgauuccuaaauaaacaagauuugacca
..((((((.(((((((((..(((((((((((((((.(((((((((((((((.(((((.((((.....................)))).)))))))))))...))))))))).))))).))))))))))..))))))))).))))))....

Structure

--ac      a         ua          -     C         ---      c     u    gacuaucag 
    caaauc uguuuauuu  GAAUCGAUGG UUAAA AACACauuu   ugacga aaauu uggc         u
    |||||| |||||||||  |||||||||| ||||| |||||||||   |||||| ||||| ||||         u
    guuuag acaaauaaa  cuuagcuacu aauuu uuguguaaa   acuguu uuuag auug         a
acca      a         uc          u     c         cuc      -     u    agcuuuuau 

Annotation confidence Not enough data

Genome context

GL348713.1: 25490071-25490220 [+]

Mature aly-miR4225

• Accession: MIMAT0017913
• Description: Arabidopsis lyrata aly-miR4225 mature miRNA
• Sequence: 21 - GAAUCGAUGGUUAAACAACAC - 41
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20407023
   Arabidopsis lyrata small RNAs: transient MIRNA and small interfering RNA loci within the Arabidopsis genus
   "Ma Z, Coruh C, Axtell MJ"
   "Plant Cell (2010) 22:1090-1103