Stem-loop rno-mir-702

Accession

MI0015464

Description

Rattus norvegicus rno-mir-702 precursor miRNA

Gene family

MIPF0001163; mir-702

Literature search

5 open access papers mention rno-mir-702
(10 sentences)

Sequence

7353 reads, 506 reads per million, 379 experiments

GUGAGUGGGGUGGUUGGCAUGgguugcccagucuggggacucgacgcugugucacagccuccugauguccuccucacgcaUGCCCACCCUUUACCCCACUCCAgggc
(.(((((((((((..((..((((((((...((..((((((((((.(((((...))))).))..)).)))).))..))))).))))).)).)))))))))))).....

Structure

----- U           UU  CA     -   cca  cu  -    -  --  c     g 
     G GAGUGGGGUGG  GG  UGggu ugc   gu  gg ggac uc  ga gcugu  
     | |||||||||||  ||  ||||| |||   ||  || |||| ||  || ||||| u
     C CUCACCCCAUU  CC  ACCCG acg   ca  cc ccug ag  cu cgaca  
cgggA -           -U  -C     U   ---  cu  u    u  uc  c     c 

Annotation confidence High

Genome context

chr12: 22721846-22721952 [-]

Mature rno-miR-702-5p

• Accession: MIMAT0017884
• Description: Rattus norvegicus rno-miR-702-5p mature miRNA
• Sequence: 1 - GUGAGUGGGGUGGUUGGCAUG - 21
• Evidence: experimental ; SOLiD [1]

Mature rno-miR-702-3p

• Accession: MIMAT0017885
• Description: Rattus norvegicus rno-miR-702-3p mature miRNA
• Sequence: 81 - UGCCCACCCUUUACCCCACUCCA - 103
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249