Stem-loop sequence rno-mir-3583

AccessionMI0015457 (change log)
DescriptionRattus norvegicus miR-3583 stem-loop
Literature search

1 open access papers mention rno-mir-3583
(2 sentences)

Stem-loop 
   -      u   -  -----          uuc  a   c      g a 
5'  cacuaa ggu ga     gcaugaagag   ag uca guucau a g
    |||||| ||| ||     ||||||||||   || ||| |||||| | u
3'  gugguu cua cu     cguacuucuc   uc agu caagua u g
   c      -   u  guuga          ucu  -   c      g c
Get sequence
Deep sequencing
344 reads, 0 reads per million, 154 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (Rnor_6.0; GCA_000001895.4) Overlapping transcripts
chr5: 150732605-150732694 [+]
sense
ENSRNOT00000017740 ; Dnajc8-201; 3'UTR (exon 4)
Database links

Mature sequence rno-miR-3583-5p

Accession MIMAT0017873
Sequence

12 -  

agcaugaagaguucagaucacguu

 - 35

Get sequence
Deep sequencing101 reads, 69 experiments
Evidence experimental; SOLiD [1]
Predicted targets

Mature sequence rno-miR-3583-3p

Accession MIMAT0017874
Sequence

53 -  

ccugacuucucucuucaugcag

 - 74

Get sequence
Deep sequencing237 reads, 120 experiments
Evidence experimental; SOLiD [1]
Predicted targets

References

1
PMID:20403161 "Small RNA expression and strain specificity in the rat" Linsen SE, de Wit E, de Bruijn E, Cuppen E BMC Genomics. 11:249(2010).