Stem-loop rno-mir-3573

Accession

MI0015444

Description

Rattus norvegicus rno-mir-3573 precursor miRNA

Literature search

2 open access papers mention rno-mir-3573
(3 sentences)

Sequence

9 reads, 1 reads per million, 8 experiments

augguuUGAGGGGCAGUGAUAGAAAGGAgauccuuuucuuucuucuccUUCCUAACUCUGCCCCCUCCCAUc
((((...(((((((((.(.(((.(((((((.............))))))).))).).))).)))))))))).

Structure

-    uuU      -   U A   A       uccuu 
 augg   GAGGGG CAG G UAG AAGGAga     u
 ||||   |||||| ||| | ||| |||||||     u
 UACC   CUCCCC GUC C AUC UUccucu     c
c    ---      C   U A   C       ucuuu 

Annotation confidence Not enough data

Genome context

chrX: 68892972-68893043 [+]

Mature rno-miR-3573-5p

• Accession: MIMAT0017856
• Description: Rattus norvegicus rno-miR-3573-5p mature miRNA
• Sequence: 7 - UGAGGGGCAGUGAUAGAAAGGA - 28
• Evidence: experimental ; SOLiD [1]

Mature rno-miR-3573-3p

• Accession: MIMAT0017857
• Description: Rattus norvegicus rno-miR-3573-3p mature miRNA
• Sequence: 49 - UUCCUAACUCUGCCCCCUCCCAU - 71
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249