Stem-loop sequence rno-mir-3573

AccessionMI0015444 (change log)
DescriptionRattus norvegicus miR-3573 stem-loop
Literature search

2 open access papers mention rno-mir-3573
(3 sentences)

Stem-loop 
   -    uuu a       u a   a       uccuu 
5'  augg   g ggggcag g uag aaggaga     u
    ||||   | ||||||| | ||| |||||||     u
3'  uacc   c ccccguc c auc uuccucu     c
   c    -cu -       u a   c       ucuuu
Get sequence
Deep sequencing
17 reads, 0 reads per million, 15 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Rnor_6.0; GCA_000001895.4) Overlapping transcripts
chrX: 68892972-68893043 [+]
sense
ENSRNOT00000009635 ; Efnb1-201; intron 1
Database links

Mature sequence rno-miR-3573-5p

Accession MIMAT0017856
Sequence

7 -  

ugaggggcagugauagaaagga

 - 28

Get sequence
Deep sequencing6 reads, 6 experiments
Evidence experimental; SOLiD [1]
Predicted targets

Mature sequence rno-miR-3573-3p

Accession MIMAT0017857
Sequence

49 -  

uuccuaacucugcccccucccau

 - 71

Get sequence
Deep sequencing10 reads, 8 experiments
Evidence experimental; SOLiD [1]
Predicted targets

References

1
PMID:20403161 "Small RNA expression and strain specificity in the rat" Linsen SE, de Wit E, de Bruijn E, Cuppen E BMC Genomics. 11:249(2010).