miRBase entry: rno-mir-3569

Stem-loop rno-mir-3569


Accession
MI0015437
Description
Rattus norvegicus rno-mir-3569 precursor miRNA
Gene family
MIPF0001797; mir-3569

Literature search
1 open access papers mention rno-mir-3569
(1 sentences)

Sequence

64 reads, 5 reads per million, 46 experiments
cagucccuuccucGGAGGACAGCAGACUCAGGUCgaaaucgggaccugagucugcgcuccucuccagcccuagacu
.((((.....((.((((((..(((((((((((((........)))))))))))))..))))))..)).....))))

Structure
c    ccuuc  -c      CA             gaa 
 aguc     cu  GGAGGA  GCAGACUCAGGUC   a
 ||||     ||  ||||||  |||||||||||||    
 ucag     ga  ucuccu  cgucugaguccag   u
-    auccc  cc      cg             ggc 


Annotation confidence Not enough data
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Genome context
chr1: 89042806-89042881 [+]

Database links

Mature rno-miR-3569

Accession MIMAT0017849
Description Rattus norvegicus rno-miR-3569 mature miRNA
Sequence 14 - GGAGGACAGCAGACUCAGGUC - 34
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 20403161
    Small RNA expression and strain specificity in the rat
    Linsen SE, de Wit E, de Bruijn E, Cuppen E
    BMC Genomics (2010) 11:249