Stem-loop sequence rno-mir-466d

Accession

MI0015419 (change log)

Description

Rattus norvegicus miR-466d stem-loop

Gene family

MIPF0000316; mir-467

Literature search

9 open access papers mention rno-mir-466d
(79 sentences)

Stem-loop

   -    cauaugacuaua             ccu            aa 
5'  ugug            uguguguguaugu   uuuguguauaug  u
    ||||            |||||||||||||   ||||||||||||   
3'  acac            acacacacauaca   aaauacauauac  a
   c    ucacaagaacaa             --c            au 

Deep sequencing

2740 reads, 0.588 reads per million, 340 experiments

Confidence

Annotation confidence: not enough data

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Database links

• EntrezGene:Mir466d
• miRBase Tracker:MI0015419

Mature sequence rno-miR-466d

• Accession: MIMAT0017824
• Sequence: 16 - auguguguguauguccuuuugu - 37
• Deep sequencing: 48 reads, 41 experiments
• Evidence: experimental; SOLiD [1]
• Predicted targets:
  • TargetScanVert:rno-miR-466d
  • miRDB:rno-miR-466d

References

1. PMID:20403161 "Small RNA expression and strain specificity in the rat" Linsen SE, de Wit E, de Bruijn E, Cuppen E BMC Genomics. 11:249(2010).