Stem-loop sequence gga-mir-3536

AccessionMI0015389 (change log)
DescriptionGallus gallus miR-3536 stem-loop
Literature search

1 open access papers mention gga-mir-3536
(4 sentences)

      a    ---       -a  aga      c     - u 
5' gcu ugcu   gcauacg  gu   cccuuu ugacu c g
   ||| ||||   |||||||  ||   |||||| ||||| | c
3' cga acga   cguaugu  ca   gggaaa gcuga g c
      a    caa       aa  ggg      u     u u 
Get sequence
Deep sequencing
22 reads, 0 reads per million, 4 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Gallus_gallus-5.0; GCA_000002315.3) Overlapping transcripts
chr25: 2139769-2139846 [+]
ENSGALT00000040675 ; UBAP2L-201; intron 14
Database links

Mature sequence gga-miR-3536

Accession MIMAT0016387

7 - 


 - 28

Get sequence
Deep sequencing16 reads, 3 experiments
Evidence experimental; Illumina [1]
Predicted targets


PMID:19891781 "Identification of differentially expressed miRNAs in chicken lung and trachea with avian influenza virus infection by a deep sequencing approach" Wang Y, Brahmakshatriya V, Zhu H, Lupiani B, Reddy SM, Yoon BJ, Gunaratne PH, Kim JH, Chen R, Wang J, Zhou H BMC Genomics. 10:512(2009).