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miRBase |
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Stem-loop sequence vvi-MIR2111 |
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Accession | MI0015370 (change log) | ||||
Description | Vitis vinifera miR2111 stem-loop | ||||
Gene family | MIPF0000754; MIR2111 | ||||
Literature search |
2 open access papers mention vvi-MIR2111 | ||||
Stem-loop |
gcaa -- c uc u u u auaa uau 5' uauugg gu agga ggguaaucugca cc gagg cuag gua c |||||| || |||| |||||||||||| || |||| |||| ||| u 3' guaacc ca uccu uucauuagacgu gg cucc gauc cgu c ---c gu c uc u u u --ga ugc |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence vvi-miR2111-5p |
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Accession | MIMAT0016364 |
Previous IDs | vvi-miR2111 |
Sequence |
23 - uaaucugcauccugaggucua - 43 |
Deep sequencing | 1347 reads, 2 experiments |
Evidence | by similarity; MI0010630 |
Mature sequence vvi-miR2111-3p |
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Accession | MIMAT0016365 |
Previous IDs | vvi-miR2111* |
Sequence |
69 - guccucugguugcagauuacu - 89 |
Deep sequencing | 34 reads, 2 experiments |
Evidence | by similarity; MI0010630 |
References |
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1 |
PMID:19854858
"Uncovering small RNA-mediated responses to phosphate deficiency in Arabidopsis by deep sequencing"
Plant Physiol. 151:2120-2132(2009).
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