miRBase entry: ahy-MIR3508

Stem-loop ahy-MIR3508


Accession
MI0015341
Description
Arachis hypogaea ahy-MIR3508 precursor miRNA

Literature search
2 open access papers mention ahy-MIR3508
(10 sentences)

Sequence

aggcaaaauucuccuaucuuugaggacacaggcgaauccucuauucucucuucugcacugccgccucguaaaucacuacugugauguggugugagcaaagaagaaUAGAGGGUCCCCAUGUUCUCAuaanuuggacugagunuuac
.......(((((((......((((((((..((.((.(((((((((((.((((.(((.(((((((.......(((((....))))))))))).).))))))))))))))))))))))..))))))))......)))..)))).....

Structure
aggcaaa    --   uaucuu        ca  c  a           c    c   a -      cucguaa     u 
       auuc  ucc      ugaggaca  gg ga uccucuauucu ucuu ugc c ugccgc       aucac a
       ||||  |||      ||||||||  || || ||||||||||| |||| ||| | ||||||       |||||  
       ugag  agg      ACUCUUGU  CC CU GGGAGAUaaga agaa acg g guggug       uagug c
--cauun    uc   uunaau        AC  -  -           -    -   a u      -------     u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ahy-miR3508

Accession MIMAT0016330
Description Arachis hypogaea ahy-miR3508 mature miRNA
Sequence 106 - UAGAGGGUCCCCAUGUUCUCA - 126
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20047695
    Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)
    Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ
    BMC Plant Biol (2010) 10:3