Stem-loop ahy-MIR394

Accession

MI0015338

Description

Arachis hypogaea ahy-MIR394 precursor miRNA

Gene family

MIPF0000100; MIR394

Literature search

2 open access papers mention ahy-MIR394
(2 sentences)

Sequence

aggcauuguuccauagccauuUUGGCAUUCUGUCCACCUCCgauccgauccgauucgggagguggccaguaggccaaacggguucugugaauaugu
..((((.((((((.((((..((((((...(((.((((((((((..((...))..)).)))))))).)))...))))))..)))).)).))))))))

Structure

ag    u    -  u    au      AUU   U        -  uc  a 
  gcau guuc ca agcc  uUUGGC   CUG CCACCUCC ga  cg  
  |||| |||| || ||||  ||||||   ||| |||||||| ||  || u
  ugua uaag gu uugg  aaaccg   gac gguggagg cu  gc  
--    -    u  c    gc      gau   c        g  ua  c 

Annotation confidence Not enough data

Genome context

Unknown

Mature ahy-miR394

• Accession: MIMAT0016326
• Description: Arachis hypogaea ahy-miR394 mature miRNA
• Sequence: 22 - UUGGCAUUCUGUCCACCUCC - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20047695
   Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)
   Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ
   BMC Plant Biol (2010) 10:3