miRBase entry: ahy-MIR167

Stem-loop ahy-MIR167


Accession
MI0015337
Description
Arachis hypogaea ahy-MIR167 precursor miRNA
Gene family
MIPF0000023; MIR167_1

Literature search
4 open access papers mention ahy-MIR167
(21 sentences)

Sequence

gaucaugcaccacuacaaguUGAAGCUGCCAGCAUGAUCUUaacuuucccucuccuaugauuuguuggggugagaucAGAUCAUGUGGCAGUUUCACCuaguuguuggaagcaugaau
..((((((.((((.((.((.(((((((((((.((((((((...(((.(((.(..(........)..)))).)))...))))))))))))))))))).)).)).).)))..))))))..

Structure
ga      -a   - u  a  u           G        Uaa   u   u uc uau 
  ucaugc  cca c ac ag UGAAGCUGCCA CAUGAUCU   cuu ccc c  c   g
  ||||||  ||| | || || ||||||||||| ||||||||   ||| ||| |  |    
  aguacg  ggu g ug uC ACUUUGACGGU GUACUAGA   gag ggg g  g   a
ua      aa   u u  a  C           -        cua   u   - uu uuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ahy-miR167-5p

Accession MIMAT0016324
Description Arachis hypogaea ahy-miR167-5p mature miRNA
Sequence 21 - UGAAGCUGCCAGCAUGAUCUU - 41
Evidence experimental
Illumina [1]

Mature ahy-miR167-3p

Accession MIMAT0016325
Description Arachis hypogaea ahy-miR167-3p mature miRNA
Sequence 78 - AGAUCAUGUGGCAGUUUCACC - 98
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20047695
    Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)
    Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ
    BMC Plant Biol (2010) 10:3