Stem-loop ahy-MIR159

Accession

MI0015335

Description

Arachis hypogaea ahy-MIR159 precursor miRNA

Gene family

MIPF0000010; MIR159

Literature search

4 open access papers mention ahy-MIR159
(9 sentences)

Sequence

aguggagcuccuugaaguccaacagagggucuugguggguagauugagcugcuaagcuauggaucccacaguacuacccauauauaccccauuaugcagugguaguucugcggauuccauauccugggagcuucauuaccuuuccacagauccuuaUUUGGAUUGAAGGGAGCUCUAcauagcauccucuuucuaau
.((((((((((((..(((((((..(((((((((((.((((((...(((((.(((.(.((((((..((.(((.(((((((.((((........))))..).)))))).))).))..)))))).).))).)))))..))))))..))).))))))))..)))))))..))))))))))))...................

Structure

------------------a            ga       ca        -   -u      auu     g   a c      uc  a   u      - -a    uac 
                   guggagcuccuu  aguccaa  gagggucu ugg  ggguag   gagcu cua g uaugga  cc cag acuacc c  uaua   c
                   ||||||||||||  |||||||  |||||||| |||  ||||||   ||||| ||| | ||||||  || ||| |||||| |  ||||    
                   cAUCUCGAGGGA  UUAGGUU  uuccuaga acc  uccauu   uucga ggu c auaccu  gg guc ugaugg g  guau   c
uaaucuuucuccuacgaua            AG       Ua        c   uu      -ac     g   c u      ua  c   u      u ac    uac 

Annotation confidence Not enough data

Genome context

Unknown

Mature ahy-miR159

• Accession: MIMAT0016321
• Description: Arachis hypogaea ahy-miR159 mature miRNA
• Sequence: 157 - UUUGGAUUGAAGGGAGCUCUA - 177
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20047695
   Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)
   Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ
   BMC Plant Biol (2010) 10:3